Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2674

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2673: 11041 - K10844 ERCC2, XPD DNA excision repair protein ERCC-2, at 734339 to 738341 11041 mRNA_2674: 11042 - Hypothetical Protein, at 738796 to 742591 11042

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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737,976 + -0.8
738,074 + -1.3
738,088 + -0.1
738,155 + -1.1
738,378 - -0.5
738,478 + -0.3
738,523 - 0.2
738,572 + 1.8
738,595 + 0.8
738,710 + 0.4
738,837 - 0.7
738,876 + 1.5
738,965 - 0.1
739,086 + -0.1
739,136 + -1.4
739,228 + 11042 mRNA_2674 0.11 0.1
739,245 - 11042 mRNA_2674 0.12 -0.1
739,265 - 11042 mRNA_2674 0.12 -1.2
739,588 + 11042 mRNA_2674 0.21 0.7
739,601 + 11042 mRNA_2674 0.21 0.3
739,857 + 11042 mRNA_2674 0.28 0.8
739,999 - 11042 mRNA_2674 0.32 0.4
740,008 + 11042 mRNA_2674 0.32 -1.2
740,012 + 11042 mRNA_2674 0.32 1.3
740,294 + 11042 mRNA_2674 0.39 0.4
740,456 + 11042 mRNA_2674 0.44 1.4
740,459 + 11042 mRNA_2674 0.44 -0.5
740,503 - 11042 mRNA_2674 0.45 0.4
740,585 - 11042 mRNA_2674 0.47 0.4
741,123 + 11042 mRNA_2674 0.61 2.2
741,149 + 11042 mRNA_2674 0.62 0.9
741,195 - 11042 mRNA_2674 0.63 0.6
741,199 + 11042 mRNA_2674 0.63 2.3
741,279 - 11042 mRNA_2674 0.65 -0.1
741,289 - 11042 mRNA_2674 0.66 0.1
741,435 - 11042 mRNA_2674 0.70 1.4
741,481 - 11042 mRNA_2674 0.71 -2.0
741,519 + 11042 mRNA_2674 0.72 -0.0
741,878 + 11042 mRNA_2674 0.81 1.0
742,326 - 2.8
742,334 - 1.4
742,338 + 0.0
742,390 - -0.9
742,638 + 0.7
742,664 - 0.9
743,026 + 1.1
743,045 - 1.3
743,048 + -0.1
743,067 + 1.0
743,223 + -0.7
743,317 - -0.0
743,354 + -1.8
743,365 - -1.2