Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2670

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2669: 11037 - Hypothetical Protein, at 722649 to 723844 11037 mRNA_2670: 11038 - SUPERFAMILY--SSF52058, at 724183 to 725340 11038 mRNA_2671: 11039 - K00111 glpA, glpD glycerol-3-phosphate dehydrogenase, at 726293 to 729723 11039

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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723,423 - 11037 mRNA_2669 0.65 -0.4
723,524 - 11037 mRNA_2669 0.73 2.3
723,566 - 11037 mRNA_2669 0.77 0.2
723,572 + 11037 mRNA_2669 0.77 0.8
723,587 + 11037 mRNA_2669 0.78 0.7
723,674 + 11037 mRNA_2669 0.86 0.3
723,718 - 11037 mRNA_2669 0.89 2.2
723,729 + 0.8
723,744 + 0.7
723,868 + 1.4
723,882 - 1.0
723,882 - 0.7
723,886 - -0.3
723,886 - 0.9
724,086 + 2.3
724,089 + -0.5
724,220 - 0.3
724,229 + 0.6
724,230 + 0.1
724,683 + 11038 mRNA_2670 0.43 -0.2
724,791 + 11038 mRNA_2670 0.53 -1.5
725,372 + -2.2
725,398 + 0.5
725,400 + 0.7
725,457 - 2.8
725,590 + 1.1
725,602 + -0.8
725,745 - 0.1
725,753 + 0.3
725,765 - 1.6
725,773 + 1.2
725,774 - 1.3
725,783 + 2.5
725,800 + -0.5
725,807 + 0.7
725,814 - 0.2
725,843 - -0.7
725,879 + 1.4
725,879 + 1.1
726,006 + 1.7
726,029 + -2.8
726,045 + 0.9
726,203 + 0.4