Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2666

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2665: 11033 - HMMPfam-Protein of unknown function (DUF3431)-PF11913, at 712409 to 714651 11033 mRNA_2666: 11034 - HMMPfam-Lipase (class 3)-PF01764,SUPERFAMILY--SSF53474, at 715009 to 717266 11034 mRNA_2667: 11035 - K05535 MNN2 alpha 1,2-mannosyltransferase, at 717860 to 720887 11035

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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714,658 + 2.3
714,969 + -1.3
715,691 + 11034 mRNA_2666 0.30 -0.6
715,720 + 11034 mRNA_2666 0.31 0.2
715,807 + 11034 mRNA_2666 0.35 1.3
715,825 - 11034 mRNA_2666 0.36 1.2
715,958 + 11034 mRNA_2666 0.42 0.8
715,959 - 11034 mRNA_2666 0.42 -0.9
715,997 + 11034 mRNA_2666 0.44 0.8
716,376 - 11034 mRNA_2666 0.61 3.0
716,579 + 11034 mRNA_2666 0.70 -1.1
716,597 - 11034 mRNA_2666 0.70 -0.4
716,602 + 11034 mRNA_2666 0.71 3.1
716,699 + 11034 mRNA_2666 0.75 -2.4
716,707 - 11034 mRNA_2666 0.75 0.8
716,759 + 11034 mRNA_2666 0.78 0.7
716,762 + 11034 mRNA_2666 0.78 2.0
716,776 + 11034 mRNA_2666 0.78 3.3
716,894 - 11034 mRNA_2666 0.83 0.1
716,924 - 11034 mRNA_2666 0.85 -0.1
716,953 - 11034 mRNA_2666 0.86 0.1
717,048 - 2.0
717,069 + 0.4
717,107 - 0.4
717,216 + 1.1
717,226 - -1.7
717,229 - -2.5
717,230 + -1.4
717,231 - -0.5
717,243 - -0.3
717,243 - 1.0
717,245 - 1.1
717,245 - 0.7
717,248 + 1.1
717,248 - 1.6
717,250 - -0.4
717,251 + -0.6
717,253 + -0.3
717,258 + -2.2
717,268 - 0.7
717,272 + -0.9
717,275 - -2.3
717,279 + -3.0
717,279 + -0.2
717,279 + 1.2
717,303 + -1.4
717,326 + 0.3
717,354 + 0.4
717,426 + 0.4
717,438 - 0.8
717,443 + -0.3
717,447 + 1.5
717,448 - 0.2
717,449 + -0.7
717,456 - -0.6
717,456 - 0.9
717,456 - -0.5
717,466 + -0.0
717,595 - 0.4
717,597 - -0.8
717,622 + 0.6
717,633 + 2.2
717,645 - -0.6
717,649 - 1.8
717,656 + -0.8
717,668 - -0.4
717,791 + 1.2
717,798 - 0.6
717,807 + 0.5
717,809 + 0.0
717,915 + 2.2
718,111 + 3.5
718,226 - 11035 mRNA_2667 0.12 0.5