Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2665

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2665: 11033 - HMMPfam-Protein of unknown function (DUF3431)-PF11913, at 712409 to 714651 11033 mRNA_2666: 11034 - HMMPfam-Lipase (class 3)-PF01764,SUPERFAMILY--SSF53474, at 715009 to 717266 11034

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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711,440 - 1.5
711,444 + -0.0
711,473 + 1.5
711,483 - -0.3
711,483 - -0.1
711,484 + -0.5
711,486 + 1.7
711,487 - 0.2
711,495 + -0.7
711,496 + -0.3
711,500 - -0.7
711,501 - -1.2
711,505 + 0.4
711,505 + 1.4
711,507 - 0.4
711,510 - 1.1
711,520 - 1.2
711,537 + -1.6
711,541 + 0.0
711,592 + -2.1
711,605 + 1.8
711,610 - 2.0
711,623 - 0.8
711,624 - 0.2
711,631 + 1.4
711,645 + 1.5
711,655 + -0.7
711,695 + -0.9
711,734 - -1.0
711,759 + -0.4
711,770 - -0.5
711,775 - -0.1
711,775 - 1.4
711,776 + 0.6
711,779 + 1.1
711,791 + 1.6
711,801 + -0.0
711,801 - 2.4
711,803 + 0.6
711,849 - 2.2
711,922 - -0.0
712,181 - 0.6
712,205 + 0.8
712,223 - -0.6
712,301 - 0.1
712,316 + -1.8
712,338 + -0.5
712,354 - -0.1
712,362 - 1.3
712,649 - 11033 mRNA_2665 0.11 0.5
712,660 + 11033 mRNA_2665 0.11 3.1
712,765 - 11033 mRNA_2665 0.16 1.7
713,671 + 11033 mRNA_2665 0.56 -0.7
713,673 + 11033 mRNA_2665 0.56 1.4
713,826 - 11033 mRNA_2665 0.63 0.0
714,658 + 2.3
714,969 + -1.3