Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2654

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2654: 11022 - K00864 glpK, GK glycerol kinase, at 685161 to 688307 11022 mRNA_2655: 11023 - HMMPfam-Protein of unknown function (DUF1479)-PF07350,SUPERFAMILY--SSF51197, at 688711 to 690606 11023

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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684,181 - -2.5
684,182 - 1.0
684,312 - 0.3
684,328 + -1.0
684,329 - 2.3
684,475 - 0.3
684,480 + 1.7
684,588 + 0.3
684,596 - -1.2
684,774 - 0.7
684,903 + 1.5
684,903 - -0.2
684,906 + 0.0
684,907 + 0.6
684,922 + 0.5
684,923 - -0.1
684,935 + -0.2
685,038 + -0.6
685,038 - 1.6
685,038 - -0.3
685,039 + -0.1
685,045 - -0.6
685,048 + -0.6
685,063 - 0.4
685,068 + -1.7
685,068 + -0.5
685,068 + -1.7
685,069 + -1.3
685,072 + -0.1
685,081 + -0.3
685,081 + 0.7
685,097 + 0.6
685,097 - 0.6
685,103 + -0.1
685,107 - 0.8
685,111 + -0.2
685,120 - 1.5
685,128 - -1.5
685,203 - 0.2
685,274 + 0.4
685,274 + 3.6
685,277 + -0.1
685,289 + 1.2
685,298 + 0.2
685,385 - -0.1
685,431 - 0.3
685,433 + -1.5
685,510 - 11022 mRNA_2654 0.11 0.4
685,562 + 11022 mRNA_2654 0.13 0.5
685,710 - 11022 mRNA_2654 0.17 -0.8
686,277 - 11022 mRNA_2654 0.35 0.2
686,288 - 11022 mRNA_2654 0.36 -2.6
686,336 - 11022 mRNA_2654 0.37 -1.0
686,606 + 11022 mRNA_2654 0.46 3.7
686,711 - 11022 mRNA_2654 0.49 2.4
686,727 - 11022 mRNA_2654 0.50 2.3
686,736 - 11022 mRNA_2654 0.50 -0.4
687,027 + 11022 mRNA_2654 0.59 1.0
687,180 + 11022 mRNA_2654 0.64 -0.6
688,160 + 2.1
688,230 - 1.4
688,323 + -0.8
688,374 - 0.4
688,410 - 0.3
688,573 - -0.0
688,574 - 1.6
688,577 - -0.3
688,582 + -1.0
688,593 + -0.8
688,594 - 0.9
688,597 - 0.8
688,610 + -0.1
688,627 + 0.1
688,645 + 0.6
688,645 + 1.6
688,662 - -1.0
688,687 - 0.9
688,776 - -2.4
688,781 + -0.1
689,121 + 11023 mRNA_2655 0.22 1.9