Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2649

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2649: 11017 - K08157 TPO1 MFS transporter, DHA1 family, multidrug resistance protein, at 672957 to 675080 11017

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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672,228 - -1.0
672,230 + 0.9
672,232 - 0.7
672,233 - 3.6
672,235 - -0.6
672,245 + -0.4
672,246 + 1.6
672,364 - 0.2
672,706 - 0.6
672,787 + -0.1
673,263 + 11017 mRNA_2649 0.14 -1.1
673,379 + 11017 mRNA_2649 0.20 -1.8
673,402 - 11017 mRNA_2649 0.21 2.8
673,685 + 11017 mRNA_2649 0.34 0.1
673,698 + 11017 mRNA_2649 0.35 0.3
673,744 + 11017 mRNA_2649 0.37 1.0
673,840 - 11017 mRNA_2649 0.42 -2.5
673,898 + 11017 mRNA_2649 0.44 0.5
673,952 - 11017 mRNA_2649 0.47 0.4
674,144 - 11017 mRNA_2649 0.56 -0.3
674,173 + 11017 mRNA_2649 0.57 2.1
674,210 - 11017 mRNA_2649 0.59 -1.0
674,315 - 11017 mRNA_2649 0.64 -0.1
674,438 - 11017 mRNA_2649 0.70 0.1
674,462 + 11017 mRNA_2649 0.71 -0.2
674,582 + 11017 mRNA_2649 0.77 0.8
674,593 - 11017 mRNA_2649 0.77 1.5
675,011 - -0.2
675,020 - 0.9
675,145 - 0.4
675,445 - 3.1
675,479 - 0.6
675,483 + 0.1
675,487 + 0.0
675,511 - -2.2
675,596 - 0.4
675,605 + 0.3
675,608 + -0.0
675,615 - -0.1
675,618 - 0.3
675,629 - 1.3
675,630 - -0.0
675,630 + -1.1
675,640 + 1.9
675,642 - 0.2
675,649 - -2.9
675,652 - -0.3
675,652 - 0.1
675,654 + 2.5
675,654 + 0.4
675,655 - 0.7
675,659 + 0.0
675,659 + -1.1
675,659 + 0.0
675,659 + 1.1
675,695 - 0.6
675,695 - 0.7
675,709 + -0.1
675,744 - -2.2
675,967 + 1.3
675,970 + 0.6
675,987 + 0.7
675,990 - 0.5