Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2639

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2638: 11006 - SMART-heat shock factor-SM00415, at 650946 to 653673 11006 mRNA_2639: 11007 - HMMPfam-Glycosyl hydrolase family 26-PF02156,SUPERFAMILY--SSF51445, at 654513 to 656042 11007 mRNA_2640: 11008 - Hypothetical Protein, at 656963 to 657920 11008

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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653,580 + -0.9
653,757 - -0.9
653,899 - 0.9
653,900 + -2.6
653,904 - -2.4
654,036 + 0.5
654,325 - 0.8
654,327 - -1.1
654,330 - -0.0
654,346 + -0.4
654,353 - 0.5
654,379 + -0.1
654,385 - -0.3
654,387 + -0.0
654,389 + 0.5
654,390 + -1.3
654,392 + 0.6
654,393 - 1.2
654,393 - -0.3
654,393 + -0.2
654,394 - 1.7
654,395 - 0.5
654,396 + 2.4
654,397 + 0.2
654,398 + 2.5
654,413 - 0.3
654,414 + 0.3
654,419 + -1.5
654,427 + -0.3
654,429 - 1.7
654,698 + 11007 mRNA_2639 0.12 0.7
654,798 + 11007 mRNA_2639 0.19 -0.3
655,132 + 11007 mRNA_2639 0.40 1.0
655,351 + 11007 mRNA_2639 0.55 -0.9
655,560 - 11007 mRNA_2639 0.68 1.6
655,645 - 11007 mRNA_2639 0.74 -0.2
655,663 + 11007 mRNA_2639 0.75 1.0
655,669 - 11007 mRNA_2639 0.76 1.0
655,832 - 11007 mRNA_2639 0.86 -0.0
655,867 + 11007 mRNA_2639 0.88 0.2
655,882 + 11007 mRNA_2639 0.89 1.2
655,990 - -0.8
656,142 + -0.6
656,158 + 0.2
656,161 + -0.7
656,328 + -0.7
656,329 - 0.2
656,461 + 0.1
656,573 - -0.5
656,596 + -0.2
656,606 - 1.4
656,769 - -0.2
656,882 + 0.1