Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2631

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2630: 10998 - KOG1581 UDP-galactose transporter related protein, at 629452 to 632288 10998 mRNA_2631: 10999 - K14803 PTC2_3 protein phosphatase PTC2/3, at 632765 to 634825 10999

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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631,782 + 10998 mRNA_2630 0.82 0.2
631,877 + 10998 mRNA_2630 0.85 0.7
631,898 - 10998 mRNA_2630 0.86 -0.6
631,935 - 10998 mRNA_2630 0.88 0.0
632,336 - 1.2
632,340 + -0.8
632,349 - 0.9
632,383 + 1.0
632,474 - 0.6
632,477 - 0.3
632,732 - -0.2
632,735 - -1.2
632,736 + 0.8
633,064 + 10999 mRNA_2631 0.15 -1.7
633,084 + 10999 mRNA_2631 0.15 -0.8
633,543 - 10999 mRNA_2631 0.38 0.7
633,649 + 10999 mRNA_2631 0.43 -0.6
633,660 - 10999 mRNA_2631 0.43 -4.2
633,699 - 10999 mRNA_2631 0.45 -0.4
634,194 + 10999 mRNA_2631 0.69 0.0
634,229 - 10999 mRNA_2631 0.71 2.0
634,229 - 10999 mRNA_2631 0.71 1.1
634,251 + 10999 mRNA_2631 0.72 -1.1
634,487 - 10999 mRNA_2631 0.84 1.1
634,532 - 10999 mRNA_2631 0.86 -1.3
634,549 + 10999 mRNA_2631 0.87 0.1
634,563 + 10999 mRNA_2631 0.87 -0.2
634,688 - 0.7
634,689 + 0.2
634,697 + -0.0
634,826 + 1.3
634,830 - -0.1
634,835 + -0.5
634,993 - -0.8
634,994 - 1.5
634,995 - 1.8
634,996 + 1.2
635,003 + 1.1
635,013 + 0.3
635,018 + 1.7
635,024 + 0.2
635,024 + -0.5
635,033 - 0.4
635,034 - 1.3
635,288 + 0.4
635,445 + -3.7
635,468 - -1.1
635,733 - 3.0
635,736 - -0.0