Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2630

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2629: 10997 - Hypothetical Protein, at 628565 to 629191 10997 mRNA_2630: 10998 - KOG1581 UDP-galactose transporter related protein, at 629452 to 632288 10998 mRNA_2631: 10999 - K14803 PTC2_3 protein phosphatase PTC2/3, at 632765 to 634825 10999

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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628,477 - 0.1
628,531 - 3.4
628,717 - 10997 mRNA_2629 0.24 -1.6
628,805 - 10997 mRNA_2629 0.38 -1.3
628,947 + 10997 mRNA_2629 0.61 0.4
628,970 - 10997 mRNA_2629 0.65 1.2
628,971 - 10997 mRNA_2629 0.65 -1.4
629,017 - 10997 mRNA_2629 0.72 -0.9
629,095 - 10997 mRNA_2629 0.85 -0.3
629,107 - 10997 mRNA_2629 0.86 0.8
629,121 - 10997 mRNA_2629 0.89 0.8
629,130 + 0.3
629,155 - 1.1
629,181 - -0.1
629,183 + -1.5
629,193 - -1.0
629,223 - 0.7
629,234 + -0.8
629,238 + 1.0
629,238 + 0.8
629,241 + -1.7
629,242 + -0.7
629,254 - 1.0
629,254 + -1.2
629,255 - 0.7
629,260 - -1.7
629,261 + -0.1
629,261 + 0.4
629,267 - -0.2
629,276 + 1.4
629,282 - 1.6
629,285 - 0.5
629,287 - -0.6
629,295 + 1.1
629,313 - 1.5
629,314 + -0.6
629,393 + 1.4
629,426 - 1.7
629,555 - 1.1
629,755 + 10998 mRNA_2630 0.11 0.2
629,760 + 10998 mRNA_2630 0.11 -0.7
629,774 + 10998 mRNA_2630 0.11 -1.5
629,876 - 10998 mRNA_2630 0.15 0.7
629,890 + 10998 mRNA_2630 0.15 3.3
629,916 - 10998 mRNA_2630 0.16 -0.1
629,920 - 10998 mRNA_2630 0.16 2.6
630,150 - 10998 mRNA_2630 0.25 -0.1
630,154 - 10998 mRNA_2630 0.25 0.2
630,443 - 10998 mRNA_2630 0.35 2.2
630,607 + 10998 mRNA_2630 0.41 -0.7
630,868 - 10998 mRNA_2630 0.50 -1.2
631,065 - 10998 mRNA_2630 0.57 0.8
631,183 - 10998 mRNA_2630 0.61 1.9
631,200 - 10998 mRNA_2630 0.62 -0.2
631,301 + 10998 mRNA_2630 0.65 1.5
631,502 + 10998 mRNA_2630 0.72 0.1
631,598 + 10998 mRNA_2630 0.76 1.0
631,694 - 10998 mRNA_2630 0.79 0.8
631,707 + 10998 mRNA_2630 0.79 0.6
631,782 + 10998 mRNA_2630 0.82 0.2
631,877 + 10998 mRNA_2630 0.85 0.7
631,898 - 10998 mRNA_2630 0.86 -0.6
631,935 - 10998 mRNA_2630 0.88 0.0
632,336 - 1.2
632,340 + -0.8
632,349 - 0.9
632,383 + 1.0
632,474 - 0.6
632,477 - 0.3
632,732 - -0.2
632,735 - -1.2
632,736 + 0.8
633,064 + 10999 mRNA_2631 0.15 -1.7
633,084 + 10999 mRNA_2631 0.15 -0.8