Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2626

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2625: 10993 - K20784 XEG113 arabinosyltransferase, at 618435 to 621494 10993 mRNA_2626: 10994 - Interpro GDP-fucose protein O-fucosyltransferase, at 621778 to 623321 10994 mRNA_2627: 10995 - K05941 E2.3.2.15 glutathione gamma-glutamylcysteinyltransferase, at 624250 to 625308 10995

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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620,813 - 10993 mRNA_2625 0.78 0.5
620,819 - 10993 mRNA_2625 0.78 -0.3
620,851 + 10993 mRNA_2625 0.79 0.8
620,975 + 10993 mRNA_2625 0.83 -0.1
621,110 - 10993 mRNA_2625 0.87 0.5
621,138 + 10993 mRNA_2625 0.88 0.2
621,400 + -0.2
621,415 - -0.7
621,513 - -2.6
621,721 - 2.5
621,833 - 1.0
622,121 - 10994 mRNA_2626 0.22 -0.5
622,171 + 10994 mRNA_2626 0.25 1.4
622,176 - 10994 mRNA_2626 0.26 -0.2
622,302 + 10994 mRNA_2626 0.34 -1.5
622,347 + 10994 mRNA_2626 0.37 -0.3
622,385 + 10994 mRNA_2626 0.39 -0.3
622,453 + 10994 mRNA_2626 0.44 1.9
622,582 - 10994 mRNA_2626 0.52 0.2
622,887 + 10994 mRNA_2626 0.72 2.1
622,990 - 10994 mRNA_2626 0.78 -0.2
623,181 + 0.8
623,305 - 1.1
623,452 - -0.8
623,457 - 0.5
623,460 + 3.0
623,461 + 0.9
623,586 + 2.4
623,608 + 2.4
623,620 - 0.7
623,622 - 0.4
623,627 - 1.3
623,631 - 1.8
623,752 + 0.3
623,761 + -1.2
623,764 - 2.0
623,771 - 1.3
623,906 + 1.9
623,908 + 0.1
623,913 + -0.3
623,919 + 1.1
624,074 + 0.6
624,167 + 0.3