Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2610

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2609: 10977 - Hypothetical Protein, at 588972 to 589930 10977 mRNA_2610: 10978 - HMMPfam-OsmC-like protein-PF02566,SUPERFAMILY--SSF82784,TIGRFAM-organ_hyd_perox peroxiredoxin, Ohr subfamily-TIGR03561, at 590070 to 590802 10978 mRNA_2611: 10979 - BLAST phosphatase iiic [Colletotrichum gloeosporioides ..., at 591297 to 591714 10979

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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589,112 + 10977 mRNA_2609 0.15 -1.2
589,319 - 10977 mRNA_2609 0.36 0.2
589,423 + 10977 mRNA_2609 0.47 0.2
589,424 - 10977 mRNA_2609 0.47 -0.3
589,531 + 10977 mRNA_2609 0.58 0.6
589,709 - 10977 mRNA_2609 0.77 2.3
589,719 + 10977 mRNA_2609 0.78 0.4
589,748 - 10977 mRNA_2609 0.81 -0.5
589,857 + -2.6
590,272 - 10978 mRNA_2610 0.28 0.2
590,403 - 10978 mRNA_2610 0.45 0.7
590,557 + 10978 mRNA_2610 0.66 0.8
590,692 - 10978 mRNA_2610 0.85 0.6
590,845 - -0.0
590,848 + 0.5
590,861 + 0.1
590,869 + 0.7
590,888 - 2.4
591,000 + 0.2
591,002 + 3.7
591,134 + -0.0
591,150 - 0.4
591,345 - 10979 mRNA_2611 0.11 0.3
591,453 + 10979 mRNA_2611 0.37 0.3