Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2606

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2605: 10973 - K02370 EXTL3 alpha-1,4-N-acetylglucosaminyltransferase EXTL3, at 577060 to 580725 10973 mRNA_2606: 10974 - Hypothetical Protein, at 581408 to 582467 10974 mRNA_2607: 10975 - KOG4102 Uncharacterized conserved protein, at 582757 to 583405 10975

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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580,561 - -0.9
580,687 + -0.6
580,693 + 0.5
580,695 + 0.3
580,793 - 0.1
580,849 + 0.2
580,938 + 1.6
580,974 + 1.1
580,981 - -0.2
580,985 + 3.9
580,997 + 0.0
581,004 + 1.5
581,111 - 1.4
581,126 - -0.6
581,275 - 0.1
581,275 + -0.5
581,440 - -0.1
581,722 + 10974 mRNA_2606 0.30 0.3
581,725 - 10974 mRNA_2606 0.30 -2.4
581,845 - 10974 mRNA_2606 0.41 -0.7
581,950 + 10974 mRNA_2606 0.51 0.1
582,063 - 10974 mRNA_2606 0.62 0.1
582,124 - 10974 mRNA_2606 0.68 0.7
582,284 + 10974 mRNA_2606 0.83 0.6
582,416 - 0.9
582,461 - 3.7
582,531 + 0.5
582,549 + -0.5
582,567 + 0.0
582,585 - 1.1
582,592 + 3.3
582,717 + -0.2
582,718 + 0.9