Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2605

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2604: 10972 - BLAST Esterase, SGNH hydrolase-type domain protein [Rho..., at 575232 to 576935 10972 mRNA_2605: 10973 - K02370 EXTL3 alpha-1,4-N-acetylglucosaminyltransferase EXTL3, at 577060 to 580725 10973 mRNA_2606: 10974 - Hypothetical Protein, at 581408 to 582467 10974

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
576,119 - 10972 mRNA_2604 0.52 1.8
576,370 + 10972 mRNA_2604 0.67 0.7
576,557 + 10972 mRNA_2604 0.78 -0.0
576,836 + 0.1
576,973 + -0.7
576,974 - -2.6
576,975 + 2.6
576,978 - 0.3
576,995 + 0.3
576,996 + 1.2
576,999 + -0.1
576,999 + -1.0
577,002 - 0.1
577,003 + 0.5
577,007 + -0.4
577,008 + 0.4
577,013 - 0.5
577,022 + 0.4
577,144 + 2.7
577,147 - -0.6
577,148 - 0.0
577,151 - 0.7
577,152 + 0.5
577,156 - 0.5
577,159 + 2.3
577,288 - -0.8
577,301 + 1.0
577,305 + -1.1
577,322 + -2.8
577,438 - 10973 mRNA_2605 0.10 1.1
577,468 - 10973 mRNA_2605 0.11 1.0
577,589 - 10973 mRNA_2605 0.14 0.3
577,589 - 10973 mRNA_2605 0.14 0.2
577,598 + 10973 mRNA_2605 0.15 0.8
577,628 + 10973 mRNA_2605 0.15 -0.3
577,693 - 10973 mRNA_2605 0.17 0.3
577,718 + 10973 mRNA_2605 0.18 1.6
577,726 + 10973 mRNA_2605 0.18 -0.4
578,052 - 10973 mRNA_2605 0.27 1.3
578,052 + 10973 mRNA_2605 0.27 -1.4
578,168 + 10973 mRNA_2605 0.30 1.0
578,443 - 10973 mRNA_2605 0.38 1.3
578,604 + 10973 mRNA_2605 0.42 -0.3
578,612 - 10973 mRNA_2605 0.42 -1.6
578,622 - 10973 mRNA_2605 0.43 -0.8
578,748 - 10973 mRNA_2605 0.46 0.5
578,767 - 10973 mRNA_2605 0.47 0.3
578,790 + 10973 mRNA_2605 0.47 -2.0
578,817 + 10973 mRNA_2605 0.48 0.6
578,906 - 10973 mRNA_2605 0.50 1.7
578,952 + 10973 mRNA_2605 0.52 0.9
579,038 - 10973 mRNA_2605 0.54 0.4
579,060 + 10973 mRNA_2605 0.55 0.6
579,172 + 10973 mRNA_2605 0.58 -0.1
579,214 + 10973 mRNA_2605 0.59 0.0
579,219 + 10973 mRNA_2605 0.59 -1.2
579,346 - 10973 mRNA_2605 0.62 0.3
579,541 - 10973 mRNA_2605 0.68 2.8
579,804 + 10973 mRNA_2605 0.75 0.0
579,951 + 10973 mRNA_2605 0.79 0.4
579,952 - 10973 mRNA_2605 0.79 -1.5
579,959 + 10973 mRNA_2605 0.79 -1.4
580,201 - 10973 mRNA_2605 0.86 -2.4
580,229 - 10973 mRNA_2605 0.86 0.0
580,263 + 10973 mRNA_2605 0.87 1.9
580,300 - 10973 mRNA_2605 0.88 2.3
580,561 - -0.9
580,687 + -0.6
580,693 + 0.5
580,695 + 0.3
580,793 - 0.1
580,849 + 0.2
580,938 + 1.6
580,974 + 1.1
580,981 - -0.2
580,985 + 3.9
580,997 + 0.0
581,004 + 1.5
581,111 - 1.4
581,126 - -0.6
581,275 - 0.1
581,275 + -0.5
581,440 - -0.1
581,722 + 10974 mRNA_2606 0.30 0.3
581,725 - 10974 mRNA_2606 0.30 -2.4