Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2604

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2603: 10971 - Hypothetical Protein, at 573332 to 575202 10971 mRNA_2604: 10972 - BLAST Esterase, SGNH hydrolase-type domain protein [Rho..., at 575232 to 576935 10972 mRNA_2605: 10973 - K02370 EXTL3 alpha-1,4-N-acetylglucosaminyltransferase EXTL3, at 577060 to 580725 10973

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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574,289 + 10971 mRNA_2603 0.51 -1.6
574,457 - 10971 mRNA_2603 0.60 -1.0
574,615 - 10971 mRNA_2603 0.69 0.4
574,630 - 10971 mRNA_2603 0.69 0.7
574,960 + 10971 mRNA_2603 0.87 0.5
575,099 + -0.0
575,269 + -1.6
575,325 - 0.3
575,337 + -0.3
575,673 + 10972 mRNA_2604 0.26 0.4
575,797 - 10972 mRNA_2604 0.33 0.3
575,817 - 10972 mRNA_2604 0.34 -0.5
575,817 + 10972 mRNA_2604 0.34 -0.9
575,825 + 10972 mRNA_2604 0.35 2.6
575,947 - 10972 mRNA_2604 0.42 -0.0
575,973 - 10972 mRNA_2604 0.43 2.6
575,980 + 10972 mRNA_2604 0.44 1.0
576,119 - 10972 mRNA_2604 0.52 1.8
576,370 + 10972 mRNA_2604 0.67 0.7
576,557 + 10972 mRNA_2604 0.78 -0.0
576,836 + 0.1
576,973 + -0.7
576,974 - -2.6
576,975 + 2.6
576,978 - 0.3
576,995 + 0.3
576,996 + 1.2
576,999 + -0.1
576,999 + -1.0
577,002 - 0.1
577,003 + 0.5
577,007 + -0.4
577,008 + 0.4
577,013 - 0.5
577,022 + 0.4
577,144 + 2.7
577,147 - -0.6
577,148 - 0.0
577,151 - 0.7
577,152 + 0.5
577,156 - 0.5
577,159 + 2.3
577,288 - -0.8
577,301 + 1.0
577,305 + -1.1
577,322 + -2.8
577,438 - 10973 mRNA_2605 0.10 1.1
577,468 - 10973 mRNA_2605 0.11 1.0
577,589 - 10973 mRNA_2605 0.14 0.3
577,589 - 10973 mRNA_2605 0.14 0.2
577,598 + 10973 mRNA_2605 0.15 0.8
577,628 + 10973 mRNA_2605 0.15 -0.3
577,693 - 10973 mRNA_2605 0.17 0.3
577,718 + 10973 mRNA_2605 0.18 1.6
577,726 + 10973 mRNA_2605 0.18 -0.4