Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2602

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2601: 10969 - Hypothetical Protein, at 570670 to 572190 10969 mRNA_2602: 10970 - HMMPfam-Glycosyltransferase family 10 (fucosyltransferase)-PF00852,SUPERFAMILY--SSF53756, at 572350 to 572862 10970 mRNA_2603: 10971 - Hypothetical Protein, at 573332 to 575202 10971

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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571,477 - 10969 mRNA_2601 0.53 1.0
571,493 - 10969 mRNA_2601 0.54 0.2
571,504 + 10969 mRNA_2601 0.55 0.1
571,545 + 10969 mRNA_2601 0.58 0.3
571,752 + 10969 mRNA_2601 0.71 -0.0
571,938 + 10969 mRNA_2601 0.83 -0.8
571,946 + 10969 mRNA_2601 0.84 -0.5
572,063 - 0.1
572,078 + 0.6
572,503 + 10970 mRNA_2602 0.30 -0.0
572,505 + 10970 mRNA_2602 0.30 0.3
572,552 + 10970 mRNA_2602 0.39 0.6
572,573 + 10970 mRNA_2602 0.43 -0.2
572,746 - 10970 mRNA_2602 0.77 -0.3
572,759 + 10970 mRNA_2602 0.80 0.4
572,841 - 1.0
573,081 - 1.9
573,107 + -0.3
573,236 + -0.7
573,249 - -0.9
573,264 - -0.8
573,265 + -0.9
573,285 - 0.3
573,447 - 3.6
573,539 - 10971 mRNA_2603 0.11 0.7
573,717 + 10971 mRNA_2603 0.21 0.2
573,724 - 10971 mRNA_2603 0.21 0.7
573,739 + 10971 mRNA_2603 0.22 2.8
573,740 - 10971 mRNA_2603 0.22 1.7