Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2598

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2597: 10965 - Hypothetical Protein, at 564104 to 565284 10965 mRNA_2598: 10966 - Hypothetical Protein, at 566184 to 566984 10966 mRNA_2599: 10967 - KOG2619 Fucosyltransferase, at 567541 to 568045 10967

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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565,226 + 1.0
565,290 - -0.6
565,374 + 1.3
565,408 + -0.0
565,572 + 0.3
565,804 + 1.6
565,918 - 0.5
566,036 - 1.9
566,042 - -0.5
566,047 - 0.7
566,073 - 0.6
566,076 - 0.3
566,077 - 0.4
566,084 + 0.2
566,085 - 0.2
566,086 + 1.2
566,096 + 0.0
566,100 - -1.5
566,100 - -0.8
566,100 - -1.3
566,102 + -1.3
566,103 + 0.8
566,103 + 1.4
566,116 - -0.5
566,117 - 0.7
566,120 + 0.3
566,126 - 1.6
566,128 - -0.7
566,130 + -0.1
566,132 - 1.4
566,135 + -0.4
566,137 - 0.1
566,146 + -0.7
566,147 + 1.3
566,148 - 0.7
566,157 + 0.9
566,258 + 0.8
566,272 - 10966 mRNA_2598 0.11 -0.8
566,278 + 10966 mRNA_2598 0.12 0.6
566,298 + 10966 mRNA_2598 0.14 2.2
566,300 + 10966 mRNA_2598 0.14 0.4
566,302 + 10966 mRNA_2598 0.15 -0.6
566,394 - 10966 mRNA_2598 0.26 0.3
566,425 + 10966 mRNA_2598 0.30 2.0
566,548 + 10966 mRNA_2598 0.45 -0.0
566,715 - 10966 mRNA_2598 0.66 0.8
566,987 - -1.0
567,007 + 0.0
567,278 - 2.3
567,296 + 0.0
567,528 - 0.5
567,549 - -1.1
567,551 + 0.7
567,702 - 10967 mRNA_2599 0.32 -2.2
567,851 - 10967 mRNA_2599 0.61 1.7