Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2560

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2559: 10927 - HMMPfam-Translin family-PF01997,SUPERFAMILY--SSF74784, at 441201 to 442474 10927 mRNA_2560: 10928 - Hypothetical Protein, at 443128 to 444142 10928

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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442,679 + -1.2
442,759 - -0.2
442,765 + 0.5
442,852 - 0.5
442,983 - 2.8
443,070 + -0.0
443,223 - 2.2
443,336 - 10928 mRNA_2560 0.20 2.3
443,388 + 10928 mRNA_2560 0.26 1.7
443,414 - 10928 mRNA_2560 0.28 -1.4
443,642 - 10928 mRNA_2560 0.51 0.3
443,650 + 10928 mRNA_2560 0.51 -0.2
443,823 - 10928 mRNA_2560 0.68 0.9
443,939 - 10928 mRNA_2560 0.80 0.9
443,942 + 10928 mRNA_2560 0.80 -0.2
444,401 - -0.1
444,623 + -0.6
444,631 - 0.2
444,708 - -0.8
444,799 - -1.3
444,820 - -0.8
444,834 - 0.4
444,882 - 2.1
444,944 + 1.1
444,975 - 0.6
445,002 - -1.0
445,081 - 2.8
445,094 - 1.5
445,111 - -0.3
445,116 - -0.7
445,120 - 1.0