Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2557

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2556: 10924 - Hypothetical Protein, at 435593 to 437275 10924 mRNA_2557: 10925 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 437565 to 439347 10925 mRNA_2558: 10926 - KOG3183 Predicted Zn-finger protein, at 439511 to 440693 10926

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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436,575 - 10924 mRNA_2556 0.58 -0.1
436,757 - 10924 mRNA_2556 0.69 1.0
437,054 - 10924 mRNA_2556 0.87 0.3
437,175 + 1.4
437,449 + 0.5
437,521 + 0.3
438,247 - 10925 mRNA_2557 0.38 2.2
438,247 - 10925 mRNA_2557 0.38 -0.7
438,253 + 10925 mRNA_2557 0.39 -0.9
438,253 + 10925 mRNA_2557 0.39 -0.2
438,253 - 10925 mRNA_2557 0.39 0.4
438,319 - 10925 mRNA_2557 0.42 1.3
438,575 - 10925 mRNA_2557 0.57 -0.1
438,662 - 10925 mRNA_2557 0.62 0.7
438,832 - 10925 mRNA_2557 0.71 -0.3
438,962 - 10925 mRNA_2557 0.78 1.0
439,070 - 10925 mRNA_2557 0.84 -2.6
439,070 - 10925 mRNA_2557 0.84 -1.7
439,273 - 1.3
439,301 - 0.6
439,994 + 10926 mRNA_2558 0.41 1.0
440,130 - 10926 mRNA_2558 0.52 1.0