Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2551

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2550: 10918 - KOG3116 Predicted C3H1-type Zn-finger protein, at 425175 to 426192 10918 mRNA_2551: 10919 - K00799 GST, gst glutathione S-transferase, at 426245 to 427122 10919 mRNA_2552: 10920 - Hypothetical Protein, at 428082 to 428710 10920

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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425,284 - 10918 mRNA_2550 0.11 2.4
425,287 - 10918 mRNA_2550 0.11 -0.0
425,296 + 10918 mRNA_2550 0.12 -1.0
425,438 - 10918 mRNA_2550 0.26 0.9
425,440 - 10918 mRNA_2550 0.26 1.4
425,720 - 10918 mRNA_2550 0.54 0.2
425,726 + 10918 mRNA_2550 0.54 0.8
425,981 - 10918 mRNA_2550 0.79 0.0
426,130 - -0.0
426,161 + 0.1
426,599 - 10919 mRNA_2551 0.40 1.6
426,608 + 10919 mRNA_2551 0.41 0.7
426,891 + 10919 mRNA_2551 0.74 -1.5
427,455 + 0.6
427,482 - -1.0
427,493 - -1.6
427,494 - -0.1
427,507 + 0.3
427,516 - 0.4
427,625 - -0.6
427,744 - -0.1
427,756 - 0.4
427,756 - 1.3
427,761 + 1.3
427,779 - -0.9
427,783 - -0.3
427,795 + 0.9
428,026 + -0.2
428,040 + 1.9
428,086 + -0.3
428,105 - 1.6
428,121 - 1.4