Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2549

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2548: 10916 - KOG1943 Beta-tubulin folding cofactor D, at 419199 to 423600 10916 mRNA_2549: 10917 - HMMPfam-Chromatin modification-related protein EAF7-PF07904, at 423711 to 424964 10917 mRNA_2550: 10918 - KOG3116 Predicted C3H1-type Zn-finger protein, at 425175 to 426192 10918

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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422,756 + 10916 mRNA_2548 0.81 0.6
422,883 - 10916 mRNA_2548 0.84 -1.6
423,269 - 0.3
423,297 + 0.6
423,359 - -0.5
423,382 - -0.8
423,456 + 0.7
424,147 - 10917 mRNA_2549 0.35 1.1
424,308 + 10917 mRNA_2549 0.48 1.6
424,972 + 2.0
424,993 + -1.3
424,995 - -1.0
425,023 - 1.7
425,284 - 10918 mRNA_2550 0.11 2.4
425,287 - 10918 mRNA_2550 0.11 -0.0
425,296 + 10918 mRNA_2550 0.12 -1.0
425,438 - 10918 mRNA_2550 0.26 0.9
425,440 - 10918 mRNA_2550 0.26 1.4
425,720 - 10918 mRNA_2550 0.54 0.2
425,726 + 10918 mRNA_2550 0.54 0.8