Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2546

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2545: 10913 - K05767 IQGAP2_3 Ras GTPase-activating-like protein IQGAP2/3, at 407193 to 413083 10913 mRNA_2546: 10914 - Hypothetical Protein, at 413634 to 416302 10914 mRNA_2547: 10915 - HMMPfam-Protein kinase domain-PF00069,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 416552 to 418992 10915

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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414,288 - 10914 mRNA_2546 0.25 1.2
414,465 - 10914 mRNA_2546 0.31 -0.5
414,477 - 10914 mRNA_2546 0.32 2.1
414,480 - 10914 mRNA_2546 0.32 0.3
414,486 - 10914 mRNA_2546 0.32 0.1
414,725 - 10914 mRNA_2546 0.41 -0.0
414,733 - 10914 mRNA_2546 0.41 0.7
414,743 + 10914 mRNA_2546 0.42 -1.3
414,744 - 10914 mRNA_2546 0.42 0.1
415,210 - 10914 mRNA_2546 0.59 -1.8
415,220 + 10914 mRNA_2546 0.59 -0.3
415,353 - 10914 mRNA_2546 0.64 0.2
415,461 - 10914 mRNA_2546 0.68 0.9
415,461 - 10914 mRNA_2546 0.68 0.8
415,466 + 10914 mRNA_2546 0.69 0.5
415,479 + 10914 mRNA_2546 0.69 -1.0
415,856 - 10914 mRNA_2546 0.83 1.8
415,950 - 10914 mRNA_2546 0.87 -0.4
416,094 - 1.4
416,190 + 0.8