Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2544

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2543: 10911 - Hypothetical Protein, at 403439 to 404457 10911 mRNA_2544: 10912 - K00046 idnO gluconate 5-dehydrogenase, at 404821 to 406181 10912

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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404,000 - 10911 mRNA_2543 0.55 0.3
404,264 - 10911 mRNA_2543 0.81 1.9
404,443 + -0.3
404,564 + 0.3
404,849 + -0.7
405,047 - 10912 mRNA_2544 0.17 0.6
405,090 + 10912 mRNA_2544 0.20 0.8
405,146 - 10912 mRNA_2544 0.24 -1.8
405,295 - 10912 mRNA_2544 0.35 1.7
405,343 - 10912 mRNA_2544 0.38 0.8
405,620 - 10912 mRNA_2544 0.59 0.1
405,625 + 10912 mRNA_2544 0.59 -0.9
405,745 + 10912 mRNA_2544 0.68 -1.6
405,858 - 10912 mRNA_2544 0.76 2.3
405,900 + 10912 mRNA_2544 0.79 -1.0
405,972 + 10912 mRNA_2544 0.85 0.1
405,973 - 10912 mRNA_2544 0.85 0.6
405,985 - 10912 mRNA_2544 0.86 2.2
406,001 - 10912 mRNA_2544 0.87 0.8
406,026 - 10912 mRNA_2544 0.89 2.7
406,042 - 10912 mRNA_2544 0.90 2.4
406,054 + -0.0
406,144 + 2.4
406,179 + -0.5
406,185 - 0.2
406,187 + -0.9
406,324 - 0.9
406,334 + -1.2
406,335 - -1.0
406,336 + -1.0
406,336 - 0.5
406,338 + 0.7
406,342 + 1.1
406,346 - 0.2
406,347 + -1.0
406,347 + -0.1
406,492 - -0.1
406,522 + -1.7
406,944 + 0.8
407,104 - 1.8