Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2543

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2542: 10910 - Hypothetical Protein, at 401521 to 403165 10910 mRNA_2543: 10911 - Hypothetical Protein, at 403439 to 404457 10911 mRNA_2544: 10912 - K00046 idnO gluconate 5-dehydrogenase, at 404821 to 406181 10912

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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402,792 - 10910 mRNA_2542 0.77 -0.0
402,813 - 10910 mRNA_2542 0.79 0.5
402,827 + 10910 mRNA_2542 0.79 0.3
402,941 + 10910 mRNA_2542 0.86 -0.2
403,062 - -0.9
403,063 + 1.6
403,069 + 0.4
403,374 + 1.7
403,396 + -0.8
403,419 + -0.2
403,633 + 10911 mRNA_2543 0.19 2.1
403,640 + 10911 mRNA_2543 0.20 0.8
404,000 - 10911 mRNA_2543 0.55 0.3
404,264 - 10911 mRNA_2543 0.81 1.9
404,443 + -0.3
404,564 + 0.3
404,849 + -0.7
405,047 - 10912 mRNA_2544 0.17 0.6
405,090 + 10912 mRNA_2544 0.20 0.8
405,146 - 10912 mRNA_2544 0.24 -1.8
405,295 - 10912 mRNA_2544 0.35 1.7
405,343 - 10912 mRNA_2544 0.38 0.8