Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2529

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2528: 10896 - HMMPfam-Fungal chitosanase of glycosyl hydrolase group 75-PF07335, at 365082 to 366780 10896 mRNA_2529: 10897 - K01613 psd, PISD phosphatidylserine decarboxylase, at 366940 to 368677 10897 mRNA_2530: 10898 - K14634 TIGAR fructose-2,6-bisphosphatase, at 368950 to 370646 10898

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
365,991 - 10896 mRNA_2528 0.54 0.2
366,085 + 10896 mRNA_2528 0.59 -0.7
366,710 + 0.3
367,018 - 1.1
367,274 - 10897 mRNA_2529 0.19 1.3
367,460 - 10897 mRNA_2529 0.30 -0.7
367,469 + 10897 mRNA_2529 0.30 1.8
367,690 - 10897 mRNA_2529 0.43 0.9
367,720 - 10897 mRNA_2529 0.45 1.2
367,759 - 10897 mRNA_2529 0.47 0.9
367,842 + 10897 mRNA_2529 0.52 1.3
367,871 + 10897 mRNA_2529 0.54 0.6
367,922 - 10897 mRNA_2529 0.57 3.9
367,996 + 10897 mRNA_2529 0.61 -1.1
367,996 + 10897 mRNA_2529 0.61 -1.7
367,997 - 10897 mRNA_2529 0.61 0.2
368,122 + 10897 mRNA_2529 0.68 -1.5
368,172 - 10897 mRNA_2529 0.71 3.0
368,180 + 10897 mRNA_2529 0.71 2.1
368,213 - 10897 mRNA_2529 0.73 -0.7
368,219 - 10897 mRNA_2529 0.74 -3.2
368,287 - 10897 mRNA_2529 0.78 -0.3
368,747 - -0.1
368,761 + 2.1
368,772 + 2.5
369,193 + 10898 mRNA_2530 0.14 -1.9
369,440 + 10898 mRNA_2530 0.29 -0.3
369,446 + 10898 mRNA_2530 0.29 -1.0
369,574 - 10898 mRNA_2530 0.37 0.9
369,653 - 10898 mRNA_2530 0.41 0.3