Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2527

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2527: 10895 - BLAST protein DGCR14-like [Mucor ambiguus], at 363824 to 364696 10895 mRNA_2528: 10896 - HMMPfam-Fungal chitosanase of glycosyl hydrolase group 75-PF07335, at 365082 to 366780 10896

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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363,014 + 0.7
363,019 + -0.1
363,038 + 2.2
363,160 - 1.0
363,202 - -0.2
363,203 - 2.1
363,205 + 1.6
363,209 + -0.4
363,215 - -0.2
363,232 + 1.3
363,288 + -0.6
363,520 + -1.1
363,586 + -0.5
363,658 + -0.2
363,691 - 0.3
363,938 - 10895 mRNA_2527 0.13 0.0
363,941 + 10895 mRNA_2527 0.13 2.2
364,197 - 10895 mRNA_2527 0.43 1.9
364,236 - 10895 mRNA_2527 0.47 0.0
364,249 + 10895 mRNA_2527 0.49 -1.5
364,801 + -1.1
365,106 + 0.4
365,272 + 10896 mRNA_2528 0.11 -1.7