Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2523

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2522: 10890 - BLAST GPI ethanolamine phosphate transferase 2 [Talaromyces..., at 348835 to 350135 10890 mRNA_2523: 10891 - Hypothetical Protein, at 351016 to 351939 10891 mRNA_2524: 10892 - BLAST Immunoglobulin-like domain contaning protein [Rho..., at 352373 to 353826 10892

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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350,418 + -0.1
350,591 + 0.1
350,629 - -1.5
350,686 + 0.1
350,951 - 1.9
351,395 - 10891 mRNA_2523 0.41 1.4
351,419 + 10891 mRNA_2523 0.44 -0.1
351,543 + 10891 mRNA_2523 0.57 0.2
351,549 + 10891 mRNA_2523 0.58 1.8
351,690 + 10891 mRNA_2523 0.73 -1.6
351,829 - 10891 mRNA_2523 0.88 -1.7
351,839 + 10891 mRNA_2523 0.89 -0.2
351,971 - -1.4
352,141 - -0.2
352,262 + -0.3
352,300 - 1.6
352,528 + 10892 mRNA_2524 0.11 -1.3
352,694 - 10892 mRNA_2524 0.22 2.8
352,702 + 10892 mRNA_2524 0.23 -0.3