Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2502

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2501: 10869 - K00852 rbsK, RBKS ribokinase, at 301795 to 303224 10869 mRNA_2502: 10870 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 303475 to 306650 10870 mRNA_2503: 10871 - SUPERFAMILY--SSF63829, at 307178 to 308891 10871

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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302,896 + 10869 mRNA_2501 0.77 0.0
303,033 + 10869 mRNA_2501 0.87 -0.3
303,064 - 10869 mRNA_2501 0.89 0.5
303,386 + -1.4
303,454 - -1.1
303,504 + 0.5
304,082 - 10870 mRNA_2502 0.19 -2.5
304,362 + 10870 mRNA_2502 0.28 0.4
304,378 - 10870 mRNA_2502 0.28 -1.1
304,843 - 10870 mRNA_2502 0.43 2.1
305,384 - 10870 mRNA_2502 0.60 -3.0
305,389 + 10870 mRNA_2502 0.60 0.7
305,669 - 10870 mRNA_2502 0.69 -0.1
305,817 + 10870 mRNA_2502 0.74 1.3
305,825 + 10870 mRNA_2502 0.74 -1.5
305,835 - 10870 mRNA_2502 0.74 -0.2
305,947 - 10870 mRNA_2502 0.78 -0.1
305,986 + 10870 mRNA_2502 0.79 -1.0
306,151 + 10870 mRNA_2502 0.84 2.7
306,308 - 10870 mRNA_2502 0.89 -1.1
306,310 + 10870 mRNA_2502 0.89 1.8
306,316 - 10870 mRNA_2502 0.89 0.8
306,318 - 10870 mRNA_2502 0.90 1.0
306,511 + 0.9
306,570 - -0.7
306,591 - 4.1
306,593 - -1.9
306,594 - -1.2
306,595 + 0.3
306,609 - 0.0
306,611 + -0.7
306,717 - 2.2
306,728 - -0.7
306,734 - -1.8
306,750 + 1.3
306,801 - -2.3
306,818 - 1.4
306,824 + -0.5
306,841 + 1.0
306,847 - 0.2
306,851 - 2.0
306,852 - 0.9
306,856 - -1.8
306,884 - 0.3
306,887 - 0.2
306,887 - 1.3
306,895 + -0.6
306,904 - -0.5
306,982 + 0.5
306,987 - -0.5
306,996 + 1.3
306,998 - -0.8
306,999 + -0.2
307,008 + 0.8
307,021 + 1.8
307,046 - -0.6
307,058 - 1.8
307,063 - 0.1
307,073 - 2.2
307,077 - 0.4
307,081 + 0.5
307,125 - 3.3
307,143 - 0.1
307,149 + 2.8
307,196 + 0.5
307,197 + 0.2
307,199 + 0.6
307,206 - 0.5
307,208 + 0.1
307,208 + 0.4
307,211 + 2.8
307,212 - -1.0
307,222 - -0.8
307,233 + 1.4
307,235 - -0.1
307,238 + 3.1
307,247 + -0.6
307,252 + -0.3
307,253 - 3.0
307,255 - -0.1
307,328 - -0.8