Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2485

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2484: 10852 - K11498 CENPE centromeric protein E, at 257699 to 260992 10852 mRNA_2485: 10853 - K07760 CDK cyclin-dependent kinase, at 261080 to 262482 10853 mRNA_2486: 10854 - KOG3134 Predicted membrane protein, at 262874 to 263661 10854

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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260,231 + 10852 mRNA_2484 0.77 -1.5
260,285 - 10852 mRNA_2484 0.79 -0.5
260,327 + 10852 mRNA_2484 0.80 2.1
260,557 - 10852 mRNA_2484 0.87 1.0
260,571 - 10852 mRNA_2484 0.87 0.4
260,582 + 10852 mRNA_2484 0.88 -0.4
260,793 + 0.4
260,850 + 0.7
261,008 + -2.1
261,016 - 0.7
261,100 + -0.4
261,487 + 10853 mRNA_2485 0.29 1.4
261,612 + 10853 mRNA_2485 0.38 -2.7
261,805 + 10853 mRNA_2485 0.52 -1.2
262,677 + 0.8
262,724 + -0.3
262,759 + -0.8
262,811 - -0.1
262,959 - 10854 mRNA_2486 0.11 -0.5
262,960 + 10854 mRNA_2486 0.11 0.4
262,967 - 10854 mRNA_2486 0.12 0.6
263,096 - 10854 mRNA_2486 0.28 -1.5
263,407 - 10854 mRNA_2486 0.68 0.7
263,438 - 10854 mRNA_2486 0.72 1.0