Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2482

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2482: 10850 - KOG0712 Molecular chaperone (DnaJ superfamily), at 252498 to 254224 10850 mRNA_2483: 10851 - K17541 SCYL2 SCY1-like protein 2, at 254371 to 257459 10851

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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251,608 - 1.3
251,918 + -0.4
251,944 - 1.1
252,056 + -0.7
252,057 + 0.9
252,092 - 1.1
252,161 - 0.2
252,187 + -0.4
252,196 - 1.4
252,232 + 1.2
252,258 - 0.2
252,265 - 1.1
252,372 + 0.3
252,372 - -0.2
252,373 - -1.1
252,387 + -0.6
252,826 - 10850 mRNA_2482 0.19 -0.3
253,230 - 10850 mRNA_2482 0.42 0.7
253,402 - 10850 mRNA_2482 0.52 0.2
253,412 + 10850 mRNA_2482 0.53 -0.6
253,430 + 10850 mRNA_2482 0.54 2.2
253,557 - 10850 mRNA_2482 0.61 -0.7
253,684 + 10850 mRNA_2482 0.69 -0.9
253,859 - 10850 mRNA_2482 0.79 -1.0
253,981 - 10850 mRNA_2482 0.86 -1.0
253,986 + 10850 mRNA_2482 0.86 0.8
253,986 + 10850 mRNA_2482 0.86 0.0
253,994 - 10850 mRNA_2482 0.87 -0.5
254,036 + 10850 mRNA_2482 0.89 0.2
254,147 - -0.2
254,149 - 1.3
254,303 + -0.4
254,307 + -0.4
254,318 - 0.8
254,458 - -0.1
254,715 - 10851 mRNA_2483 0.11 0.0
254,721 - 10851 mRNA_2483 0.11 0.6
254,742 - 10851 mRNA_2483 0.12 3.0
254,751 + 10851 mRNA_2483 0.12 -1.3
254,871 + 10851 mRNA_2483 0.16 0.3
255,057 - 10851 mRNA_2483 0.22 -0.4
255,058 + 10851 mRNA_2483 0.22 0.2