Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2479

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2478: 10846 - K20293 COG6, COD2 conserved oligomeric Golgi complex subunit 6, at 243520 to 246165 10846 mRNA_2479: 10847 - Hypothetical Protein, at 246856 to 249133 10847 mRNA_2480: 10848 - KOG0907 Thioredoxin, at 249211 to 249707 10848 mRNA_2481: 10849 - Hypothetical Protein, at 250037 to 250801 10849

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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245,930 + 0.3
245,932 - 0.7
245,940 + 0.7
245,944 - -3.6
246,209 + -0.4
246,238 - -1.9
246,247 - 0.2
246,251 + -1.4
246,253 - 2.2
246,253 + 2.0
246,383 + -0.6
246,391 - -0.4
246,394 + -1.2
246,525 - -1.3
246,533 - 0.2
246,537 - 0.5
246,856 - -0.5
246,862 - 1.4
247,101 - 10847 mRNA_2479 0.11 0.6
247,383 + 10847 mRNA_2479 0.23 0.7
247,690 - 10847 mRNA_2479 0.37 0.3
247,864 + 10847 mRNA_2479 0.44 -0.4
247,865 + 10847 mRNA_2479 0.44 1.7
247,965 + 10847 mRNA_2479 0.49 2.9
247,984 + 10847 mRNA_2479 0.50 0.5
248,277 - 10847 mRNA_2479 0.62 -0.4
248,303 + 10847 mRNA_2479 0.64 -0.0
248,379 - 10847 mRNA_2479 0.67 0.3
248,746 + 10847 mRNA_2479 0.83 -0.3
249,000 + -0.9
249,276 - 10848 mRNA_2480 0.13 0.8
249,293 - 10848 mRNA_2480 0.16 0.3
249,423 - 10848 mRNA_2480 0.43 0.3
249,719 + -0.5
249,864 - 0.7
249,869 + 1.8
249,874 - 0.2
249,885 + 0.6
250,016 + -1.5
250,042 - 0.4
250,049 - -1.6
250,054 + -0.2
250,085 - -0.1
250,100 + 0.1
250,108 + 0.6