Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2474

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2473: 10841 - K01610 E4.1.1.49, pckA phosphoenolpyruvate carboxykinase (ATP), at 230136 to 233558 10841 mRNA_2474: 10842 - KOG0603 Ribosomal protein S6 kinase, at 234258 to 235956 10842 mRNA_2475: 10843 - BLAST CAMK protein kinase [Microbotryum lychnidis-dioicae p..., at 236278 to 238719 10843

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
233,258 + 1.9
233,258 - 0.6
233,258 + 0.2
233,260 + -0.1
233,303 - 1.9
233,304 + -0.3
233,304 + -0.9
233,309 + 0.3
233,309 + 0.3
233,312 + -2.7
233,318 - 0.2
233,324 - 0.5
233,325 - -0.3
233,327 + -0.2
233,330 - -0.6
233,331 - 0.9
233,331 - 1.0
233,334 + -0.1
233,338 - 0.1
233,340 + -2.0
233,346 - 0.0
233,347 + -0.7
233,349 + 0.9
233,353 + -0.4
233,356 + 1.1
233,356 - -0.1
233,359 - -1.5
233,360 - 0.6
233,361 - -0.1
233,370 - -1.1
233,374 + 1.9
233,385 + -1.5
233,386 - 2.7
233,485 - 0.2
233,502 - 2.0
233,508 + 3.4
233,513 + 2.0
233,514 - -0.0
233,639 + -0.1
233,830 + 1.2
233,860 - 0.6
233,926 + -0.4
233,950 - -0.4
233,966 + 0.5
234,238 + -2.1
234,907 - 10842 mRNA_2474 0.38 -1.1
234,952 - 10842 mRNA_2474 0.41 -0.3
235,024 - 10842 mRNA_2474 0.45 -0.6
235,152 - 10842 mRNA_2474 0.53 0.8
235,234 - 10842 mRNA_2474 0.57 1.2
235,296 - 10842 mRNA_2474 0.61 2.4
235,303 - 10842 mRNA_2474 0.62 -0.3
235,346 + 10842 mRNA_2474 0.64 1.6
235,725 - 10842 mRNA_2474 0.86 -2.5
235,738 - 10842 mRNA_2474 0.87 -0.4
236,183 - 2.1
236,291 + 0.3
236,410 - 0.2
236,472 - -1.7
236,473 + -1.6
236,488 + 1.2
236,843 - 10843 mRNA_2475 0.23 -0.4