Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2471

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2471: 10839 - K13104 ZNF830, CCDC16 zinc finger protein 830, at 227199 to 228171 10839 mRNA_2472: 10840 - K07836 RAP1B Ras-related protein Rap-1B, at 228685 to 229666 10840

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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226,723 - -1.5
226,726 + 1.3
226,734 + -1.1
226,737 - 0.4
226,738 - 2.9
226,739 + 0.8
226,749 + 0.1
226,774 - 0.7
226,896 + -2.3
226,916 + -1.0
227,052 + -0.9
227,497 - 10839 mRNA_2471 0.31 -0.7
227,655 - 10839 mRNA_2471 0.47 0.0
228,073 + 10839 mRNA_2471 0.90 0.3
228,073 - 10839 mRNA_2471 0.90 0.1
228,088 - -0.9
228,170 - 0.5
228,217 - -0.6
228,218 + 0.2
228,335 - 1.2
228,346 - 2.0
228,348 - 0.1
228,360 + -1.1
228,367 + 1.3
228,372 + 0.7
228,464 - -0.1
228,466 + 0.7
228,523 - -0.1
228,644 - 0.8
228,757 - 1.1