Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2438

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2438: 10806 - HMMPfam-Predicted coiled-coil protein (DUF2205)-PF10224, at 131945 to 132522 10806 mRNA_2439: 10807 - BLAST ribosome biogenesis protein [Moniliophthora rorer..., at 132736 to 133822 10807

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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130,946 + 2.9
130,948 - 1.3
130,986 - 0.5
131,063 - 0.2
131,067 + 2.0
131,067 - 0.3
131,069 - -0.1
131,153 + 0.3
131,158 - -0.3
131,169 - 1.3
131,183 - 0.6
131,196 - 0.8
131,205 - 0.1
131,206 - 0.8
131,207 + 0.8
131,230 + -0.2
131,233 + 1.1
131,239 + 1.7
131,252 + 0.1
131,263 - 1.2
131,264 + -2.0
131,271 - 0.7
131,286 - -0.0
131,374 - 0.8
131,390 - 3.1
131,405 + 0.1
131,825 + -0.8
132,276 + 10806 mRNA_2438 0.57 -0.5
132,540 - 0.8
132,544 - -0.3
132,547 - -0.1
132,548 + 0.4
132,566 + -0.1
132,573 - 1.8
132,573 + 2.3
132,575 + -0.2
132,713 - 0.2
132,728 + 0.5
132,730 + 0.2
132,731 + 0.7