Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2417

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2416: 10784 - SUPERFAMILY--SSF51445, at 72061 to 74634 10784 mRNA_2417: 10785 - SUPERFAMILY--SSF52047, at 74792 to 76110 10785 mRNA_2418: 10786 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 77070 to 79296 10786

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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74,016 + 10784 mRNA_2416 0.76 -0.7
74,257 + 10784 mRNA_2416 0.85 0.5
74,478 + 1.7
74,481 + 1.0
74,542 - -0.4
74,605 + 3.0
74,777 - 1.3
75,237 + 10785 mRNA_2417 0.34 0.9
75,400 + 10785 mRNA_2417 0.46 -1.9
75,428 + 10785 mRNA_2417 0.48 -0.2
75,987 - 1.5
76,075 - 0.3
76,116 - 0.6
76,120 - 0.8
76,168 - 1.2
76,252 - 3.1
76,258 - 0.0
76,267 + 2.7
76,425 - 1.9
76,446 + -0.4
76,447 - 0.5
76,460 + -0.1
76,557 - -0.8
76,594 - 1.0
76,974 + 0.3