Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2355

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2354: 10722 - K01580 E4.1.1.15, gadB, gadA, GAD glutamate decarboxylase, at 692257 to 694787 10722 mRNA_2355: 10723 - Hypothetical Protein, at 694855 to 695610 10723 mRNA_2356: 10724 - Hypothetical Protein, at 696468 to 697388 10724

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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693,922 - 10722 mRNA_2354 0.66 -0.5
694,058 - 10722 mRNA_2354 0.71 -0.1
694,223 - 10722 mRNA_2354 0.78 2.4
694,326 + 10722 mRNA_2354 0.82 0.1
694,345 - 10722 mRNA_2354 0.82 -1.3
695,221 - 10723 mRNA_2355 0.48 0.8
695,657 - -0.6
695,808 - 0.6
695,958 - 0.7
695,961 + 2.7
695,967 - -0.4
695,970 - -0.6
695,971 + -0.5
696,136 + -0.1