Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2284

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2283: 10651 - KOG1674 Cyclin, at 524604 to 524992 10651 mRNA_2284: 10652 - Hypothetical Protein, at 525584 to 526132 10652 mRNA_2285: 10653 - SUPERFAMILY--SSF53300, at 526661 to 528036 10653

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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524,722 + 10651 mRNA_2283 0.30 0.0
524,847 + 10651 mRNA_2283 0.62 0.4
524,853 + 10651 mRNA_2283 0.64 -0.4
525,090 + -0.0
525,140 + -0.4
525,271 - 2.0
525,410 + -0.8
525,575 + -0.5
525,576 - -0.2
525,589 + 1.2
525,652 - 10652 mRNA_2284 0.12 1.4
525,665 - 10652 mRNA_2284 0.15 2.0
525,689 + 10652 mRNA_2284 0.19 0.1
525,691 + 10652 mRNA_2284 0.19 0.4
525,713 - 10652 mRNA_2284 0.23 -0.3
525,717 + 10652 mRNA_2284 0.24 -0.0
525,719 + 10652 mRNA_2284 0.25 0.2
525,722 + 10652 mRNA_2284 0.25 0.8
525,727 + 10652 mRNA_2284 0.26 -0.5
525,732 + 10652 mRNA_2284 0.27 -1.5
525,747 + 10652 mRNA_2284 0.30 1.7
525,751 + 10652 mRNA_2284 0.30 -0.3
525,753 - 10652 mRNA_2284 0.31 0.6
525,754 - 10652 mRNA_2284 0.31 1.0
525,766 - 10652 mRNA_2284 0.33 0.7
525,767 + 10652 mRNA_2284 0.33 0.6
525,773 + 10652 mRNA_2284 0.34 1.5
525,797 + 10652 mRNA_2284 0.39 -0.2
525,806 - 10652 mRNA_2284 0.40 -0.7
525,833 + 10652 mRNA_2284 0.45 -0.0
525,833 + 10652 mRNA_2284 0.45 0.1
525,847 + 10652 mRNA_2284 0.48 1.7
525,855 + 10652 mRNA_2284 0.49 4.2
525,857 - 10652 mRNA_2284 0.50 -2.4
525,862 + 10652 mRNA_2284 0.51 -0.6
525,864 + 10652 mRNA_2284 0.51 0.7
525,871 - 10652 mRNA_2284 0.52 -1.1
525,876 + 10652 mRNA_2284 0.53 1.4
525,878 - 10652 mRNA_2284 0.54 0.6
525,971 - 10652 mRNA_2284 0.70 1.0
525,977 - 10652 mRNA_2284 0.72 -0.5
525,987 + 10652 mRNA_2284 0.73 0.6
525,996 - 10652 mRNA_2284 0.75 -1.0
526,002 - 10652 mRNA_2284 0.76 -0.0
526,011 - 10652 mRNA_2284 0.78 -0.2
526,020 + 10652 mRNA_2284 0.79 1.1
526,025 - 10652 mRNA_2284 0.80 3.0
526,027 - 10652 mRNA_2284 0.81 1.8
526,040 + 10652 mRNA_2284 0.83 -0.9
526,043 - 10652 mRNA_2284 0.84 -0.3
526,045 + 10652 mRNA_2284 0.84 0.1
526,047 + 10652 mRNA_2284 0.84 -1.7
526,052 + 10652 mRNA_2284 0.85 -0.7
526,053 + 10652 mRNA_2284 0.85 2.0
526,056 + 10652 mRNA_2284 0.86 -0.5
526,060 + 10652 mRNA_2284 0.87 0.1
526,060 + 10652 mRNA_2284 0.87 -2.7
526,064 + 10652 mRNA_2284 0.87 0.3
526,065 - 10652 mRNA_2284 0.88 0.5
526,066 + 10652 mRNA_2284 0.88 -2.4
526,068 + 10652 mRNA_2284 0.88 0.3
526,070 + 10652 mRNA_2284 0.89 -1.7
526,078 - 2.4
526,082 + 1.2
526,082 - -1.3
526,085 - 2.6
526,087 + -0.8
526,106 + 1.0
526,106 + 1.9
526,116 + 0.2
526,116 - 0.3
526,117 - 0.4
526,125 - -0.5
526,129 + 0.0
526,132 - -1.7
526,138 - -0.6
526,149 + -0.0
526,164 + 0.4
526,174 - 0.3
526,181 - -0.4
526,184 + -1.6
526,186 + 0.6
526,192 + 0.2
526,193 + 2.8
526,195 - 1.3
526,198 + 2.7
526,199 - 0.3
526,204 - 2.1
526,210 + 0.8
526,214 - 0.5
526,234 + -0.2
526,254 - 1.7
526,275 - 3.6
526,279 - -1.1
526,289 - 2.0
526,296 + 0.7
526,297 - 0.3
526,298 + 0.5
526,303 + -0.8
526,307 + 1.6
526,309 - 1.1
526,324 - -1.1
526,331 + 0.3
526,333 + 0.7
526,334 + 0.5
526,344 - 0.6
526,345 - 0.5
526,453 + 0.6
526,460 + 0.2
526,500 + 0.0
526,526 + 0.8
526,655 - 0.4
526,672 + -0.1
526,679 + -0.5
526,804 + 10653 mRNA_2285 0.10 -0.0
526,925 + 10653 mRNA_2285 0.19 -0.8