Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2283

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2283: 10651 - KOG1674 Cyclin, at 524604 to 524992 10651 mRNA_2284: 10652 - Hypothetical Protein, at 525584 to 526132 10652

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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523,659 - -0.5
523,959 - 3.1
524,081 + -1.3
524,309 + 0.6
524,722 + 10651 mRNA_2283 0.30 0.0
524,847 + 10651 mRNA_2283 0.62 0.4
524,853 + 10651 mRNA_2283 0.64 -0.4
525,090 + -0.0
525,140 + -0.4
525,271 - 2.0
525,410 + -0.8
525,575 + -0.5
525,576 - -0.2
525,589 + 1.2
525,652 - 10652 mRNA_2284 0.12 1.4
525,665 - 10652 mRNA_2284 0.15 2.0
525,689 + 10652 mRNA_2284 0.19 0.1
525,691 + 10652 mRNA_2284 0.19 0.4
525,713 - 10652 mRNA_2284 0.23 -0.3
525,717 + 10652 mRNA_2284 0.24 -0.0
525,719 + 10652 mRNA_2284 0.25 0.2
525,722 + 10652 mRNA_2284 0.25 0.8
525,727 + 10652 mRNA_2284 0.26 -0.5
525,732 + 10652 mRNA_2284 0.27 -1.5
525,747 + 10652 mRNA_2284 0.30 1.7
525,751 + 10652 mRNA_2284 0.30 -0.3
525,753 - 10652 mRNA_2284 0.31 0.6
525,754 - 10652 mRNA_2284 0.31 1.0
525,766 - 10652 mRNA_2284 0.33 0.7
525,767 + 10652 mRNA_2284 0.33 0.6
525,773 + 10652 mRNA_2284 0.34 1.5
525,797 + 10652 mRNA_2284 0.39 -0.2
525,806 - 10652 mRNA_2284 0.40 -0.7
525,833 + 10652 mRNA_2284 0.45 -0.0
525,833 + 10652 mRNA_2284 0.45 0.1
525,847 + 10652 mRNA_2284 0.48 1.7
525,855 + 10652 mRNA_2284 0.49 4.2
525,857 - 10652 mRNA_2284 0.50 -2.4
525,862 + 10652 mRNA_2284 0.51 -0.6
525,864 + 10652 mRNA_2284 0.51 0.7
525,871 - 10652 mRNA_2284 0.52 -1.1
525,876 + 10652 mRNA_2284 0.53 1.4
525,878 - 10652 mRNA_2284 0.54 0.6
525,971 - 10652 mRNA_2284 0.70 1.0
525,977 - 10652 mRNA_2284 0.72 -0.5
525,987 + 10652 mRNA_2284 0.73 0.6