Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2251

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2250: 10618 - HMMPfam-Apolipoprotein O-PF09769, at 464729 to 465798 10618 mRNA_2251: 10619 - KOG3313 Molecular chaperone Prefoldin, subunit 3, at 466202 to 467815 10619 mRNA_2252: 10620 - HMMPfam-Signal recognition particle 9 kDa protein (SRP9)-PF05486,SUPERFAMILY--SSF54762, at 468078 to 468584 10620

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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465,280 - 10618 mRNA_2250 0.51 -0.4
465,325 + 10618 mRNA_2250 0.56 1.1
465,446 - 10618 mRNA_2250 0.67 -0.4
465,560 - 10618 mRNA_2250 0.78 -1.4
465,572 + 10618 mRNA_2250 0.79 -0.2
465,572 + 10618 mRNA_2250 0.79 0.6
465,736 - -1.4
465,742 + -1.3
465,744 + -1.0
465,992 + 0.1
465,993 - 0.9
466,010 + 0.7
466,029 - -0.4
466,142 - -1.9
466,158 + -0.5
466,699 + 10619 mRNA_2251 0.31 1.7
466,777 + 10619 mRNA_2251 0.36 1.5
466,863 + 10619 mRNA_2251 0.41 -2.0
467,334 - 10619 mRNA_2251 0.70 1.4
467,748 + 1.0
467,759 + -0.6
467,802 + 0.6
467,916 - -1.7
468,036 - -0.1
468,206 - 10620 mRNA_2252 0.25 1.2
468,629 + -1.7
468,794 + -1.0