Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2175

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2174: 10542 - K14009 BCAP31, BAP31 B-cell receptor-associated protein 31, at 254027 to 255180 10542 mRNA_2175: 10543 - HMMPfam-Mus7/MMS22 family-PF09462, at 255474 to 261372 10543 mRNA_2176: 10544 - Hypothetical Protein, at 262297 to 263218 10544

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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254,503 - 10542 mRNA_2174 0.41 -0.8
254,530 + 10542 mRNA_2174 0.44 -0.5
254,560 - 10542 mRNA_2174 0.46 0.1
254,566 - 10542 mRNA_2174 0.47 0.1
254,705 + 10542 mRNA_2174 0.59 0.9
254,779 - 10542 mRNA_2174 0.65 -0.6
254,932 + 10542 mRNA_2174 0.78 1.6
254,933 - 10542 mRNA_2174 0.79 0.0
254,938 - 10542 mRNA_2174 0.79 -3.0
254,946 + 10542 mRNA_2174 0.80 -0.0
254,955 + 10542 mRNA_2174 0.80 -0.7
255,100 - -1.3
255,208 + 0.5
255,246 - 1.4
255,251 + 1.0
255,281 - -0.5
255,415 - 0.0
255,845 - 0.4
256,246 - 10543 mRNA_2175 0.13 0.6
256,612 + 10543 mRNA_2175 0.19 -0.8
260,970 - -0.0
260,971 - -3.5
261,093 + 0.1
261,125 + 1.2
261,417 - 0.2
261,423 - 0.9
261,443 - 2.0
261,458 + 0.8
261,554 - -0.8
261,568 - -0.2
261,588 - 0.3
261,618 + -1.3
261,711 - -0.0
261,879 - 0.2
261,896 + -1.8
262,162 + -0.5
262,312 + -0.2