Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2166

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2165: 10533 - Hypothetical Protein, at 233429 to 233973 10533 mRNA_2166: 10534 - Hypothetical Protein, at 234700 to 236014 10534 mRNA_2167: 10535 - K03143 TFIIH3, GTF2H3, TFB4 transcription initiation factor TFIIH subunit 3, at 236232 to 237790 10535

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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233,731 + 10533 mRNA_2165 0.55 -0.3
233,793 - 10533 mRNA_2165 0.67 1.1
233,803 + 10533 mRNA_2165 0.69 -0.2
234,097 + 0.0
234,099 - 1.4
234,115 + 2.4
234,188 - 0.3
234,279 + 2.8
234,406 - 1.0
234,413 + 1.3
234,493 - -0.9
234,811 - 0.5
234,826 - -0.1
234,834 - 10534 mRNA_2166 0.10 -0.1
234,834 - 10534 mRNA_2166 0.10 1.3
234,981 - 10534 mRNA_2166 0.21 1.9
235,130 - 10534 mRNA_2166 0.33 1.6
235,268 + 10534 mRNA_2166 0.43 0.7
235,278 - 10534 mRNA_2166 0.44 -1.1
235,297 + 10534 mRNA_2166 0.45 0.8
235,335 + 10534 mRNA_2166 0.48 1.3
235,716 - 10534 mRNA_2166 0.77 -0.8
235,792 + 10534 mRNA_2166 0.83 0.8
235,880 - 10534 mRNA_2166 0.90 0.8
236,018 - -0.5
236,022 - -0.5
236,033 + 1.0
236,072 + 0.6
236,078 + -0.6