Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2146

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2145: 10513 - HMMPfam-Protein of unknown function DUF89-PF01937,SUPERFAMILY--SSF111321, at 183733 to 185513 10513 mRNA_2146: 10514 - K15100 SLC25A1, CTP solute carrier family 25 (mitochondrial citrate transporter), member 1, at 185762 to 187254 10514 mRNA_2147: 10515 - K01719 hemD, UROS uroporphyrinogen-III synthase, at 187353 to 188300 10515

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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184,776 + 10513 mRNA_2145 0.59 0.4
184,855 + 10513 mRNA_2145 0.63 1.3
184,868 + 10513 mRNA_2145 0.64 1.5
184,875 + 10513 mRNA_2145 0.64 -1.7
184,955 + 10513 mRNA_2145 0.69 -0.0
184,989 + 10513 mRNA_2145 0.71 1.9
185,050 - 10513 mRNA_2145 0.74 0.7
185,151 + 10513 mRNA_2145 0.80 1.1
185,162 - 10513 mRNA_2145 0.80 -0.0
185,163 + 10513 mRNA_2145 0.80 0.8
185,185 - 10513 mRNA_2145 0.82 0.3
185,195 + 10513 mRNA_2145 0.82 -0.8
185,249 - 10513 mRNA_2145 0.85 1.4
185,253 + 10513 mRNA_2145 0.85 2.2
185,316 + 10513 mRNA_2145 0.89 -0.4
185,439 + -0.5
185,507 - 0.6
185,656 + -0.4
185,681 - 0.3
185,718 - 0.2
185,720 + 0.3
185,759 - 0.3
185,759 - -1.2
185,835 + -1.2
185,871 + 2.1
185,921 - 10514 mRNA_2146 0.11 1.8
185,972 + 10514 mRNA_2146 0.14 1.3
185,982 - 10514 mRNA_2146 0.15 1.1
186,136 + 10514 mRNA_2146 0.25 0.6
186,415 - 10514 mRNA_2146 0.44 -0.4
186,469 - 10514 mRNA_2146 0.47 -1.3
186,755 - 10514 mRNA_2146 0.67 0.3
187,176 + 1.7
187,183 - -0.3
187,186 - -2.2