Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2129

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2128: 10496 - Hypothetical Protein, at 135879 to 136766 10496 mRNA_2129: 10497 - K17741 GRE2 NADPH-dependent methylglyoxal reductase, at 136937 to 138468 10497 mRNA_2130: 10498 - Hypothetical Protein, at 138636 to 139652 10498

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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136,482 - 10496 mRNA_2128 0.68 0.6
136,566 + 10496 mRNA_2128 0.77 0.2
136,609 + 10496 mRNA_2128 0.82 2.4
136,721 - 0.3
136,739 - -0.2
136,783 - 0.5
136,923 + 0.4
137,034 - 0.7
137,035 + -0.3
137,059 - 2.6
137,252 + 10497 mRNA_2129 0.21 1.9
137,252 + 10497 mRNA_2129 0.21 -0.7
137,381 + 10497 mRNA_2129 0.29 2.3
137,628 - 10497 mRNA_2129 0.45 0.9
137,667 + 10497 mRNA_2129 0.48 2.5
137,671 + 10497 mRNA_2129 0.48 0.3
137,809 + 10497 mRNA_2129 0.57 1.7
138,020 - 10497 mRNA_2129 0.71 1.6
138,100 - 10497 mRNA_2129 0.76 0.0
138,106 + 10497 mRNA_2129 0.76 -0.7
138,266 + 10497 mRNA_2129 0.87 -0.4
138,533 + 0.3
138,654 + -1.1
138,657 + 0.9
138,706 - 0.6
138,981 - 10498 mRNA_2130 0.34 -0.7
138,996 + 10498 mRNA_2130 0.35 0.2
139,209 + 10498 mRNA_2130 0.56 -0.0
139,405 - 10498 mRNA_2130 0.76 1.8