Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2074

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2073: 10441 - Hypothetical Protein, at 8998 to 9576 10441 mRNA_2074: 10442 - HMMPfam-Chromate transporter-PF02417, at 9879 to 11848 10442

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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8,884 - 1.2
8,887 + -1.9
8,889 + 1.2
8,899 - 1.0
8,902 + 0.1
8,904 + 0.1
9,068 - 10441 mRNA_2073 0.12 -1.2
9,479 + 10441 mRNA_2073 0.83 1.7
9,483 - 10441 mRNA_2073 0.84 -0.3
9,487 - 10441 mRNA_2073 0.84 0.3
9,623 + 0.3
9,739 - 2.1
9,785 - 0.1
9,788 - 0.0
9,788 - 1.5
9,936 + -0.7
10,090 - 10442 mRNA_2074 0.11 1.3
10,272 + 10442 mRNA_2074 0.20 -1.9
11,852 - -0.6
12,047 + -0.4
12,269 - -0.3
12,274 + -0.8
12,274 - -0.0
12,281 - 2.0
12,287 + 0.2
12,292 + -0.6
12,420 + -0.2
12,431 + 1.7
12,581 - -0.6