Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2072

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2072: 10440 - KOG2908 26S proteasome regulatory complex, subunit RPN9/PSMD13, at 7627 to 8732 10440 mRNA_2073: 10441 - Hypothetical Protein, at 8998 to 9576 10441

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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6,722 - 0.1
6,732 + 1.3
6,745 - -0.3
6,763 - 1.0
6,779 + -0.1
6,808 - 1.7
6,922 + 0.3
6,968 + 0.6
7,066 - 1.7
7,103 + 0.3
7,108 + 1.1
7,197 + 1.9
7,714 - 0.6
8,479 + 10440 mRNA_2072 0.77 -1.2
8,538 - 10440 mRNA_2072 0.82 -0.0
8,691 - 2.3
8,715 + -0.1
8,729 + 0.5
8,729 + 0.4
8,816 + -0.6
8,816 + -0.6
8,848 + -0.4
8,864 - 0.8
8,884 - 1.2
8,887 + -1.9
8,889 + 1.2
8,899 - 1.0
8,902 + 0.1
8,904 + 0.1
9,068 - 10441 mRNA_2073 0.12 -1.2
9,479 + 10441 mRNA_2073 0.83 1.7
9,483 - 10441 mRNA_2073 0.84 -0.3
9,487 - 10441 mRNA_2073 0.84 0.3
9,623 + 0.3