Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2068

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2067: 10435 - BLAST cell morphogenesis protein [Grosmannia clavigera ..., at 868963 to 869751 10435 mRNA_2068: 10436 - Hypothetical Protein, at 869923 to 870194 10436

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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868,932 - 0.3
868,957 - -1.0
868,974 + 1.0
868,980 - -0.3
868,983 - -2.0
869,027 - 1.0
869,097 + 10435 mRNA_2067 0.17 -0.2
869,174 + 10435 mRNA_2067 0.27 2.4
869,210 - 10435 mRNA_2067 0.31 0.9
869,232 + 10435 mRNA_2067 0.34 -0.1
869,239 - 10435 mRNA_2067 0.35 0.3
869,248 - 10435 mRNA_2067 0.36 1.2
869,360 - 10435 mRNA_2067 0.50 -0.7
869,379 - 10435 mRNA_2067 0.53 0.6
869,379 - 10435 mRNA_2067 0.53 1.8
869,385 + 10435 mRNA_2067 0.53 -0.2
869,405 - 10435 mRNA_2067 0.56 2.7
869,405 - 10435 mRNA_2067 0.56 1.1
869,406 + 10435 mRNA_2067 0.56 2.9
869,493 - 10435 mRNA_2067 0.67 1.4
869,524 - 10435 mRNA_2067 0.71 1.6
869,540 - 10435 mRNA_2067 0.73 0.4
869,591 - 10435 mRNA_2067 0.80 1.5
869,620 - 10435 mRNA_2067 0.83 1.1
869,624 - 10435 mRNA_2067 0.84 1.4
869,629 - 10435 mRNA_2067 0.84 -0.5
869,641 - 10435 mRNA_2067 0.86 0.3
869,651 - 10435 mRNA_2067 0.87 0.7
869,689 - 0.4
869,714 + -1.9
869,721 - 1.4
869,758 - 0.7
869,758 + 0.9
869,771 - 0.8
869,775 - 1.9
869,795 - 1.7
869,864 - -0.8
869,866 - -1.0
869,877 - 1.2
869,881 - 1.4
869,903 - 0.0
869,904 - 0.2
869,908 - 0.6
869,923 - -0.3
869,942 - 0.2
869,943 - 1.3
869,948 - 1.6
869,964 + 10436 mRNA_2068 0.15 1.8
869,966 - 10436 mRNA_2068 0.16 1.3
869,990 + 10436 mRNA_2068 0.25 1.5
869,990 + 10436 mRNA_2068 0.25 0.4
869,990 - 10436 mRNA_2068 0.25 -1.3
870,004 - 10436 mRNA_2068 0.30 2.0
870,012 + 10436 mRNA_2068 0.33 0.4
870,033 - 10436 mRNA_2068 0.40 2.0
870,035 - 10436 mRNA_2068 0.41 -2.8
870,042 - 10436 mRNA_2068 0.44 0.2
870,044 + 10436 mRNA_2068 0.44 -0.2
870,054 + 10436 mRNA_2068 0.48 0.8
870,056 - 10436 mRNA_2068 0.49 -1.0
870,058 - 10436 mRNA_2068 0.50 1.2
870,061 - 10436 mRNA_2068 0.51 -2.0
870,070 - 10436 mRNA_2068 0.54 -1.5
870,086 - 10436 mRNA_2068 0.60 0.5
870,086 - 10436 mRNA_2068 0.60 0.7
870,093 + 10436 mRNA_2068 0.62 2.5
870,107 - 10436 mRNA_2068 0.68 0.3
870,112 + 10436 mRNA_2068 0.69 -0.3
870,127 - 10436 mRNA_2068 0.75 -0.2
870,145 - 10436 mRNA_2068 0.82 0.2
870,148 - 10436 mRNA_2068 0.83 2.6
870,158 - 10436 mRNA_2068 0.86 1.8
870,171 + 1.3
870,172 - 1.4
870,172 - 2.8
870,172 - 0.7
870,172 - -0.3
870,173 + 0.0
870,173 + 0.5
870,176 - 2.6
870,180 - 0.2
870,192 - -1.0
870,205 - 2.0
870,210 - 0.6
870,210 - -0.9
870,210 - 1.3
870,210 - 0.4
870,210 - 1.0