Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2066

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2065: 10433 - Hypothetical Protein, at 866238 to 867408 10433 mRNA_2066: 10434 - SUPERFAMILY--SSF52047, at 867605 to 868583 10434 mRNA_2067: 10435 - BLAST cell morphogenesis protein [Grosmannia clavigera ..., at 868963 to 869751 10435

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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866,697 - 10433 mRNA_2065 0.39 2.7
866,716 - 10433 mRNA_2065 0.41 -1.2
866,868 - 10433 mRNA_2065 0.54 0.9
866,876 - 10433 mRNA_2065 0.54 -0.5
867,206 - 10433 mRNA_2065 0.83 0.5
867,288 - 10433 mRNA_2065 0.90 2.3
867,319 - -1.0
867,385 + 0.2
867,431 - -0.8
867,466 - 1.6
867,479 - 4.0
867,486 + -0.1
867,486 + 0.6
867,488 - -1.1
867,574 - 0.2
867,583 - -0.5
867,596 - 0.3
867,619 + 0.4
867,639 - 1.3
867,944 - 10434 mRNA_2066 0.35 1.3
867,948 + 10434 mRNA_2066 0.35 1.5
867,991 - 10434 mRNA_2066 0.39 1.2
868,059 - 10434 mRNA_2066 0.46 1.3
868,066 + 10434 mRNA_2066 0.47 0.5
868,214 + 10434 mRNA_2066 0.62 1.5
868,253 - 10434 mRNA_2066 0.66 0.3
868,298 - 10434 mRNA_2066 0.71 -0.9
868,342 - 10434 mRNA_2066 0.75 0.4
868,390 - 10434 mRNA_2066 0.80 -0.0
868,493 - 1.0
868,501 + 1.4
868,534 + 0.5
868,534 + 0.5
868,555 - -1.6
868,625 - 0.6
868,626 - 0.3
868,645 - 0.2
868,712 - 1.2
868,813 - 1.2
868,875 - -1.7
868,932 - 0.3
868,957 - -1.0
868,974 + 1.0
868,980 - -0.3
868,983 - -2.0
869,027 - 1.0
869,097 + 10435 mRNA_2067 0.17 -0.2
869,174 + 10435 mRNA_2067 0.27 2.4
869,210 - 10435 mRNA_2067 0.31 0.9
869,232 + 10435 mRNA_2067 0.34 -0.1
869,239 - 10435 mRNA_2067 0.35 0.3
869,248 - 10435 mRNA_2067 0.36 1.2
869,360 - 10435 mRNA_2067 0.50 -0.7
869,379 - 10435 mRNA_2067 0.53 0.6
869,379 - 10435 mRNA_2067 0.53 1.8
869,385 + 10435 mRNA_2067 0.53 -0.2
869,405 - 10435 mRNA_2067 0.56 2.7
869,405 - 10435 mRNA_2067 0.56 1.1
869,406 + 10435 mRNA_2067 0.56 2.9
869,493 - 10435 mRNA_2067 0.67 1.4
869,524 - 10435 mRNA_2067 0.71 1.6
869,540 - 10435 mRNA_2067 0.73 0.4