Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2056

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2055: 10423 - KOG2817 Predicted E3 ubiquitin ligase, at 846243 to 848116 10423 mRNA_2056: 10424 - K11667 INO80C, IES6 INO80 complex subunit C, at 848164 to 849134 10424 mRNA_2057: 10425 - KOG3010 Methyltransferase, at 849514 to 850707 10425

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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847,299 - 10423 mRNA_2055 0.56 -0.6
847,522 - 10423 mRNA_2055 0.68 1.3
847,670 + 10423 mRNA_2055 0.76 0.7
847,821 - 10423 mRNA_2055 0.84 0.3
847,966 - -0.3
848,139 + -0.2
848,144 - 0.2
848,556 + 10424 mRNA_2056 0.40 0.9
848,706 + 10424 mRNA_2056 0.56 -0.2
849,269 - 1.8
849,273 + -0.1
849,302 - -2.6
849,410 - 1.5
849,416 - -1.3
849,437 - -1.5
849,461 + -1.7
849,595 + 1.4
849,710 - 10425 mRNA_2057 0.16 -0.6
849,742 + 10425 mRNA_2057 0.19 0.5
849,838 + 10425 mRNA_2057 0.27 0.8