Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2051

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2050: 10418 - K02725 PSMA1 20S proteasome subunit alpha 6, at 835073 to 836370 10418 mRNA_2051: 10419 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 836699 to 837795 10419 mRNA_2052: 10420 - KOG1399 Flavin-containing monooxygenase, at 838709 to 841749 10420

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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836,326 + 0.6
836,519 - 1.1
836,541 + -0.9
836,542 - 0.2
836,680 - -0.0
836,819 - 10419 mRNA_2051 0.11 0.3
836,856 + 10419 mRNA_2051 0.14 -0.1
837,095 - 10419 mRNA_2051 0.36 2.0
837,140 + 10419 mRNA_2051 0.40 -0.4
837,447 + 10419 mRNA_2051 0.68 0.4
837,538 - 10419 mRNA_2051 0.76 -1.5
837,827 - -0.5
837,959 - 0.4
838,000 - -0.1
838,130 + 1.5
838,279 - -0.3
838,309 + 1.0
838,414 + -0.7
838,483 + -2.2
838,535 - 0.2
838,538 + -0.3
838,568 - 2.2
838,569 + 0.1
838,570 + 1.3
838,571 + 0.2
838,571 + -0.4
838,572 + 1.2
838,579 + 0.7
838,580 + -0.2
838,583 + -1.8
838,587 + 0.7
838,595 + -0.3
838,596 + 2.4
838,597 + -1.9
838,760 + 1.5