Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2044

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2043: 10411 - Hypothetical Protein, at 820577 to 820768 10411 mRNA_2044: 10412 - HMMPfam-Domain of unknown function (DUF1793)-PF08760,SUPERFAMILY--SSF48208, at 821249 to 824656 10412 mRNA_2045: 10413 - Hypothetical Protein, at 824885 to 825949 10413

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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820,822 - 2.9
820,941 - 1.9
820,942 + 0.5
820,943 + 1.1
820,958 + -0.3
821,104 - -0.8
821,137 + -0.4
821,140 + 0.6
821,163 + 1.5
821,166 + 1.0
821,176 - -0.3
821,179 + -0.1
821,179 + 0.6
821,228 + -0.8
821,343 + 0.8
821,630 + 10412 mRNA_2044 0.11 -0.1
821,723 + 10412 mRNA_2044 0.14 -0.0
821,895 + 10412 mRNA_2044 0.19 1.1
821,901 - 10412 mRNA_2044 0.19 -0.2
821,940 + 10412 mRNA_2044 0.20 1.8
822,194 + 10412 mRNA_2044 0.28 1.3
822,335 - 10412 mRNA_2044 0.32 -0.5
822,764 - 10412 mRNA_2044 0.44 -0.9
823,351 - 10412 mRNA_2044 0.62 0.5
823,463 - 10412 mRNA_2044 0.65 2.0
824,375 - 0.4
824,508 + -1.1
824,541 + -0.6
824,556 + 0.0
824,950 - 0.6
824,955 - 0.3
824,961 + 0.4
825,179 - 10413 mRNA_2045 0.28 1.7
825,381 - 10413 mRNA_2045 0.47 1.5
825,485 + 10413 mRNA_2045 0.56 0.6