Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2039

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2038: 10406 - Hypothetical Protein, at 807338 to 808315 10406 mRNA_2039: 10407 - KOG2895 Uncharacterized conserved protein, at 808552 to 810897 10407 mRNA_2040: 10408 - K11729 ACAD10 acyl-CoA dehydrogenase family member 10, at 811231 to 813728 10408

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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807,559 - 10406 mRNA_2038 0.23 -0.6
807,687 + 10406 mRNA_2038 0.36 1.3
808,295 + 1.1
808,329 + 2.1
808,335 - 0.8
808,900 + 10407 mRNA_2039 0.15 0.4
809,927 + 10407 mRNA_2039 0.59 -0.0
810,455 - 10407 mRNA_2039 0.81 -0.2
810,465 + 10407 mRNA_2039 0.82 0.9
810,509 - 10407 mRNA_2039 0.83 -0.2
810,735 - -0.1
810,817 + 0.7
811,068 + -0.1
811,081 + 1.7
811,081 + 0.3
811,084 - 1.5
811,116 - 0.1
811,117 - 3.6
811,138 - -0.2
811,140 + 2.4
811,140 - -0.5
811,225 - -0.0
811,247 + -0.5
811,269 + -0.1
811,547 - 10408 mRNA_2040 0.13 0.4
811,549 + 10408 mRNA_2040 0.13 -0.2
811,553 + 10408 mRNA_2040 0.13 0.6
811,842 - 10408 mRNA_2040 0.24 0.5
811,845 + 10408 mRNA_2040 0.25 -0.6